eSSENCE Publications
Below you will find a list of all peer-review publications in scientific journals from the eSSENCE research groups in 2010-2012.

Acknowledgements
We ask all eSSENCE researchers to acknowledge the research program in their publications/presentations:

For work directly funded by eSSENCE:
This work was supported by the Swedish strategic research programme eSSENCE.

For work originating from the eSSENCE environment, irrespective funding:
This work forms part of the Swedish strategic research programme eSSENCE.


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AuthorsTitleJournal / ConferenceYear
Heliasz, Michal; Johansson, Torbjörn; Lindroth, Anders; Mölder, Meelis; Mastepanov, Mikhail; Friborg, Thomas; Callaghan, Terry V.; Christensen, TorbenQuantification of C uptake in subarctic birch forest after setback by an extreme insect outbreakGeophysical Research Letters, 38, , 2011
Yuan, Wenping; Luo, Yiqi; Li, Xianglan; Liu, Shuguang; Yu, Guirui; Zhou, Tao; Bahn, Michael; Black, Andy; Desai, Ankur R.; Cescatti, Alessandro; Marcolla, Barbara; Jacobs, Cor; Chen, Jiquan;Redefinition and global estimation of basal ecosystem respiration rateGlobal Biogeochemical Cycles, 25, ,2011
Flores, S., Sherman, M., Bruns, C., Eastman, P. & Altman, R.Fast flexible modeling of RNA structure using internal coordinatesIEEE/ACM Trans Comput Biol Bioinform, 8, , 12472011
H. Jakobsson, F. Bengzon, and M. G. LarsonAdaptive Component Mode Synthesis in Linear ElasticityInternat. J. Numer. Methods Engrg., 86, , 829–8442011
R. Udawalpola, E. Wadbro, and M. BerggrenOptimization of a variable mouth acoustic hornInternat. J. Numer. Methods Engrg., 85 , , 591–6062011
Dribe, Martin; Lundh, ChristerCultural Dissimilarity and Intermarriage. A Longitudinal Study of Immigrants in Sweden 1990-2005International Migration Review, 45, 2, 297-3242011
Helsing, Johan; Johansson, B. TomasFast reconstruction of harmonic functions from Cauchy data using the Dirichlet-to-Neumann map and integral equationsInverse Problems in Science and Engineering, 19, 5, 717-7272011
Mao, Bo; Ban, Yifang; Harrie, LarsA framework for visualization of city models based on CityGML and X3DISPRS Journal, , , 2011
Mao, Bo; Ban, Yifang; Harrie, LarsA multiple representation data structure for dynamic visualisation of generalised 3D city modelsISPRS Journal of Photogrammetry and Remote Sensing, 66, 2, 198-2082011
Niklas Ottosson, Michael Odelius, Daniel Spångberg, Wandared Pokapanich, Mattias Svanqvist, Gunnar O? hrwall, Bernd Winter, and Olle Bjo? rneholmCations Strongly Reduce Electron-Hopping Rates in Aqueous SolutionsJ. Am. Chem. Soc., 133, 34, 13489­-134952011
Niklas Ottosson, Knut J. Børve, Daniel Spa? ngberg, Henrik Bergersen, Leif J. Sæthre, Manfred Faubel, Wandared Pokapanich, Gunnar O? hrwall, Olle Bjo? rneholm, and Bernd WinterOn the Origins of Core? Electron Chemical Shifts of Small Biomolecules in Aqueous Solution: Insights from Photoemission and ab Initio Calculations of Glycine_aqJ. Am. Chem. Soc., In press, , 2011
Díaz, L., Bujons, J., Delgado, A., Gutiérrez-de-Terán, H. & Åqvist, J. Computational Prediction of Structure-Activity Relationships for the Binding of Aminocyclitols to ?-GlucocerebrosidaseJ. Chem. Inf. Model. , 51, , 6012011
van Lun, M., van der Spoel, D. & Andersson, I. Subunit Interface Dynamics in Hexadecameric RubiscoJ. Mol. Biol., 411, , 10832011
Daniel Spångberg, Daniel S. D. Larsson and David van der SpoelTrajectory NG: portable, compressed, general molecular dynamics trajectoriesJ. Mol. Mod., 17, 10, 2669-26852011
Behzadi, H., Talei, M.R., Olyai, B. & van der Spoel, D.Probing 13C chemical shielding tensors in cryptolepine and two bromosubstituted analogs for antiplasmodial activityJ. Mol. Model. , 17, , 32892011
Spångberg, D., Larsson, D.S.D. & van der Spoel, D.Trajectory Next Generation J. Mol. Model. , 17, , 26692011
Kamerlin, S.C.L.A theoretical comparison of p-nitrophenyl phosphate and sulfate hydrolysis in aqueous solutionJ. Org. Chem., 76, , 92282011
D. Raymand, A.C.T. van Duin, W.A. Goddard III, K. Hermansson, D. SpångbergHydroxylation Structure and Proton Transfer Reactivity at the Zinc Oxide-Water InterfaceJ. Phys. Chem. C, 115, , 8573-85792011
Platonov, Pyotr; Nault, Isabelle; Holmqvist, Fredrik; Stridh, Martin; Hocini, M; Haissaguerre, MLeft atrial appendage activity translation in the standard 12-lead ECGJournal of Cardiovascular Electrophysiology, 22, 6, 706-7102011
Carlsson, Marcus; Töger, Johannes; Kanski, Mikael; Markenroth Bloch, Karin; Ståhlberg, Freddy; Heiberg, Einar; Arheden, HåkanQuantification and visualization of cardiovascular 4D velocity mapping accelerated with parallel imaging or k-t BLAST: head to head comparison and validation at 1.5 T and 3 TJournal of Cardiovascular Magnetic Resonance, 13, , 2011
Lu Zhansheng Muller Carsten Yang Zongxian et al.SO(x) on ceria from adsorbed SO(2)JOURNAL OF CHEMICAL PHYSICS, 134, 18, 1847032011
Emanuel H. RubenssonNonmonotonic recursive polynomial expansions for linear scaling calculation of the density matrixJournal of Chemical Theory and Computation, 7, , 1233-12362011
Elias Rudberg, Emanuel H. Rubensson, and Pawel SalekKohn–Sham density functional theory electronic structure calculations with linearly scaling computational time and memory usageJournal of Chemical Theory and Computation, 7, , 350-3602011
T. Löfstedt and J. TryggOnPLS - a novel multiblock method for the modelling of predictive and orthogonal predictionJournal of Chemometrics, 25, 8, 441-4552011
Narasimhan, Bhuvana; Gullberg, MarianneThe role of input frequency and semantic transparency in the acquisition of verb meaning: Evidence from placement verbs in Tamil and DutchJournal of Child Language, 38, 3, 504-5322011
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