eSSENCE Publications
Below you will find a list of all peer-review publications in scientific journals from the eSSENCE research groups in 2010-2012.
Acknowledgements
We ask all eSSENCE researchers to acknowledge the research program in their publications/presentations:
We ask all eSSENCE researchers to acknowledge the research program in their publications/presentations:
For work directly funded by eSSENCE:
This work was supported by the Swedish strategic research programme eSSENCE.
For work originating from the eSSENCE environment, irrespective funding:
This work forms part of the Swedish strategic research programme eSSENCE.
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| Authors | Title | Journal / Conference | Year |
| F. Gustavson, L. Karlsson, and B. Kågström | Parallel and Cache-Efficient In-Place Matrix Storage Format Conversion | ACM Transactions on Mathematical Software, 38, 3, 17:1-17:32 | 2012 |
| Enroth S, Andersson CR, Andersson R, Wadelius C, Gustafsson MG, Komorowski J | A strand specific high resolution normalization method for chip-sequencing data employing multiple experimental control measurements | Algorithms Mol Biol, 7, 1, 2 | 2012 |
| R.C. Pinto, L. Gerber, M. Eliasson, B. Sundberg, and J. Trygg | Strategy for minimizing between-study variation of large-scale phenotypic experiments using multivariate analysis | Analytical Chemistry, 84, 20, 8675-8681 | 2012 |
| G.M. Kirwan, E. Johansson, R. Kleemann, E.R. Verheij, A.M. Wheelock, S. Goto, J. Trygg, and C.E. Wheelock | Building Multivariate Systems Biology Models | Analytical Chemistry, 84, , 7064-7071 | 2012 |
| M. Eliasson S. Rännar, R. Madsen, M.A. Donten, E. Marsden-Edwards, T. Moritz, J.P. Shockhor, E. Johansson, and J. Trygg | Strategy for Optimizing LC-MS Data Processing in Metabolomics: A Design of Experiments Approach | Analytical Chemistry, 84, , 6869-6876 | 2012 |
| Vicente-Serrano, Sergio M., Begueria, Santiago, Gimeno, Luis, Eklundh, Lars, Giuliani, Gregory, Weston, Derek, El Kenawy, Ahmed, Lopez-Moreno, Juan I., Nieto, Raquel, Ayenew, Tenalem, Konte, Diawoye, Ardö, Jonas, Pegram, Geoffrey G. S. | Challenges for drought mitigation in Africa: The potential use of geospatial data and drought information systems | Applied Geography, 34, , 486 | 2012 |
| Shuanglin Hu, R. Ahuja, C. G. Granqvist, K. Hermansson et al. | Optical properties of Mg-doped VO: Absorption measurements and hybrid functional calculations | Applied Physics Letters, 101, , 201902 | 2012 |
| Sun, Zhigang, Gebremichael, Mekonnen, Ardö, Jonas, Nickless, Alecia, Caquet, Blandine, Merboldh, Lutz, Kutschi, Werner | Estimation of daily evapotranspiration over Africa using MODIS/Terra and SEVIRI/MSG data | Atmospheric Research, 112, , 44 | 2012 |
| Dewhurst, Richard, Nyström, Marcus, Jarodzka, Halszka, Foulsham, Tom, Johansson, Roger, Holmqvist, Kenneth | It depends on how you look at it: Scanpath comparison in multiple dimensions with MultiMatch, a vector-based approach | Behaviour Research Methods, 44, 4, 1079-1100 | 2012 |
| Nyström, Marcus, Andersson, Richard, Holmqvist, Kenneth, van de Weijer, Joost | The influence of calibration method and eye physiology on eyetracking data quality | Behaviour Research Methods, Online publ, dx.doi.org/10.3758/s13428-012-0247-4, | 2012 |
| Oliver, Georgina, Gullberg, Marianne, Hellwig, Frauke, Mitterer, Holger, Indefrey, Peter | Acquiring L2 sentence comprehension: A longitudinal study of word monitoring in noise | Bilingualism: Language and Cognition, 15, 4, 857 | 2012 |
| David Fange, Anel Mahmutovic and Johan Elf | MesoRD 1.0 | Bioinformatics, 28, 23, 3155-3157 | 2012 |
| David van der Spoel, Paul J. van Maaren and Carl Caleman | GROMACS Molecule & Liquid Database | Bioinformatics, 28, , 752-753 | 2012 |
| Carl Nettelblad | Inferring haplotypes and parental genotypes in larger full sib-ships and other pedigrees with missing or erroneous genotype data | BMC Genetics, 13, | 2012 |
| Brian Drawert, Stefan Engblom, and Andreas Hellander | URDME: a modular framework for stochastic simulation of reaction-transport processes in com plex geometries | BMC Systems Biology, 6, , 76:1-17 | 2012 |
| Flores, S., Bernauer, J., Shin, S., Zhou, R. & Huang, X. | Multiscale modeling of macromolecular biosystems | Briefings in Bioinformatics, 13, 4, 395-405 | 2012 |
| M. Bodin, Å. Brännström, and U. Dieckmann | A systematic overview of harvesting-induced maturation evolution in predator–prey systems with three different life-history tradeoffs | Bulletin of Mathematical Biology, 74, 12, 2842-2860 | 2012 |
| Toomanian, Ara, Harrie, Lars, Olsson, Per-Ola | Automatic Symbolisation Methods for Geoportals | Cartographic Journal, 49, 2, 163 | 2012 |
| Rogers, K.E., Keränen, H., Durrant, J.D., Ratnam, J., Doak, A., Arkin, M.R. & McCammon, J.A. | Novel Cruzain Inhibitors for the Treatment of Chagas’ Disease | Chem. Biol. Drug Design, 80, , 398-405 | 2012 |
| Carl Caleman, Paul J. van Maaren, Minyan Hong, Jochen S. Hub, Luciano T. Costa, David van der Spoel | Force Field Benchmark of Organic Liquids: Density, Enthalpy of Vaporization, Heat Capacities, Surface Tension, Compressibility, Expansion Coefficient and Dielectric Constant | Chem. Theor. Comput., 8, , 61+74 | 2012 |
| Håkansson, Andreas, Fuchs, Laszlo, Revstedt, Johan, Trägårdh, Christian, Bergenståhl, Björn, Innings, Fredrik | Experimental validation of k–? RANS-CFD on a high-pressure homogenizer valve | Chemical Engineering Science, 71, , 273 | 2012 |
| Håkansson, Andreas, Innings, Fredrik, Revstedt, Johan, Trägårdh, Christian, Bergenståhl, Björn | Estimation of turbulent fragmenting forces in a high-pressure homogenizer from computational fluid dynamics | Chemical Engineering Science, 75, , 317 | 2012 |
| Probst, Michael Injan, Natcha Megyes, Tuende et al. | A gold cyano complex in nitromethane: MD simulation and X-ray diffraction | Chemical Physics Letters, 539, , 24-29 | 2012 |
| Shaw, J.J., Trobro, S., He, S., Åqvist, J. & Green R. | A Role for the 2’ OH of Peptidyl-tRNA Substrate in Peptide Release on the Ribosome Revealed through RF-Mediated Rescue | Chemistry & Biology, 19, , 883-893 | 2012 |
| Joelsson, Tobias, Yu, Rixin, Bai, Xue-Song | Large Eddy Simulation of Turbulent Combustion in a Spark-Assisted Homogenous Charge Compression Ignition Engine | Combustion Science and Technology, 184, , 1065 | 2012 |