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May 2013

Lectures on Language Technology and Learning

15 May, 2013 @ 13:00 - 17:00
Room 7-0042, English Park Campus, Uppsala University Uppsala, Sweden

Lectures on Language Technology and Learning Uppsala, May 15, 2013 The computational linguistics group at Uppsala University is delighted to invite you to an afternoon of public lectures on language technology and learning by leading experts in the field. The lectures will take place in Room 7-0042, English Park Campus, Uppsala University, on the 15th of May according to the schedule below. Attendance is free for anyone interested. 13.15-14.00    Hal Daumé III Department of Computer Science, University of Maryland Better!…

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eSSENCE – multiscale workshop 2013

28 May, 2013 @ 09:00 - 17:00
Ångström Laboratory, Room Å4101 & Å2005 Uppsala, Sweden

To push the boundaries of e-science closer to realistic applications, and to improve our understanding of chemical and physical phenomena, development of methods and models at all levels is needed, from the electronic scale to coarse-grained simulations. Not least, we must find ways to combine methods in a powerful and creative fashion to bridge the different time and length gaps in a seamless fashion. The national e-science programme eSSENCE – where Uppsala University, Lund University and Umeå University are partners…

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June 2013

eSSENCE International Workshop on Macromolecular Structure and Dynamics, Uppsala University

3 June, 2013 @ 08:00 - 5 July, 2013 @ 17:00
BMC, Uppsala University, Husargatan 3
Uppsala, 751 23 Sweden
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We are pleased to announce the "eSSENCE International Workshop on Macromolecular Structure and Dynamics", to be held June 3-5 2013 in Uppsala. eSSENCE is a Swedish founded e-science collaboration between Uppsala, Lund, and Umeå Universities. This workshop is organized with the aim of showing the latest advances in molecular simulations, featuring internationally recognized speakers from all over the world, as well as Sweden. The workshop is divided into five sessions: - Membrane Proteins - Nucleic Acids - Protein-Protein Interactions -…

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October 2013

Workshop in Computational and Mathematical Finance

8 October, 2013 @ 09:30 - 18:00
Department of Information Technology Polacksbacken, Lägerhyddsvägen 2
Uppsala, Sweden

The Centre for Interdisciplinary Mathematics (CIM <http://www.math.uu.se/CIM/>) and the Division of Scientific Computing (TDB <http://www.it.uu.se/research/scicomp>) are jointly organizing a Workshop in Computational and Mathematical Finance on October 8. You found more information and a registration form here http://www.it.uu.se/conf/compmathfin2013. The workshop is free of charge but you need to register to attend.

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November 2013

UPPMAX 10 years on November 21

21 November, 2013 @ 13:00 - 16:00
Häggsalen, Ångström Laboratory Uppsala, Sweden

UPPMAX celebrates its 10th anniversary with a symposium and inauguration of UPPNEX new compute cluster Milou and storage system Pica. Date: November 21, 2013 Time: 13-16 Place: Häggsalen, Ångström Laboratory. Web: www.uppmax.uu.se/uppmax-10-years UPPMAX (Uppsala Multidisciplinary Center for Advanced Computational Science) is Uppsala University's resource of high-performance computers, large-scale storage and know-how of high-performance computing (HPC). UPPMAX  is one of the six centra in the national metacenter Swedish National Infrastructure for Computing (SNIC) www.uppmax.uu.se Formal Program 13.00 Welcome, Hans Karlsson, Director…

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June 2014

Multiscale materials modelling – 2014

2 June, 2014 - 4 June, 2014
Ångström, Ångström 2004
Uppsala, Sweden

The 2014 eSSENCE meeting on "Multiscale materials modelling" at the Ångström Laboratory, 2-4 June 2014 You are very welcome to participate and contribute! Register until May 15 on the web! Book hotel room(s) before May 5 (if you want to make use of our pre-booked rooms). PROGRAM: We use the word “materials” in a broad sense, i.e. including molecules, liquids and interfaces. Day 1 will start at 13.00 and end with a poster session, drinks and a buffet dinner (free…

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January 2015

e-Infrastructures for Massively Parallel Sequencing

19 January, 2015 - 20 January, 2015
Science for Life Laboratory Uppsala, Sweden

Workshop: e-Infrastructures for Massively Parallel Sequencing This workshop will bring together scientists sharing their experiences on how to build efficient and sustainable e-infrastructures for massively parallel sequencing data management and storage, as well as setting up and maintaining an associated ecosystem of workflows, pipelines, and bioinformatics software. Dates: Jan 19-20, 2015 Venue: Science for Life Laboratory, Uppsala University, Sweden Website: http://www.uppnex.se/events/eInfraMPS2015 Sessions: 1) e-infrastructures for NGS 2) NGS pipelines in action 3) Clinical data management 4) Workflow systems 5) Virtual…

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Tutorial: RNA-seq data analysis using Chipster

20 January, 2015
Uppsala Biomedical Center (BMC), Computer room A6:003
Uppsala,

January 20, 2015, at 13.00 - 16.00 Computer room A6:003, Uppsala Biomedical Center (BMC) Course leader: Eija Korpelainen, CSC - IT Center for Science, Finland This tutorial covers quality control (FastQC and PRINSEQ), alignment (TopHat) and quantification (HTSeq) as well as differential expression analysis (edgeR and DESeq) and genome browser visualization. The user-friendly Chipster software is used in the exercises, so no previous knowledge of Unix or R is required and the tutorial is thus suitable for everybody. Participants may…

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eSSENCE Workshop on Frontiers in Computational Biomedicine

27 January, 2015
Polhemsalen, Ångström Laboratory Uppsala, Sweden

Date: Tuesday January 27, 2015 Time: 13:15-17:00 Location: Polhemsalen, Ångström Laboratory In connection with the conferment ceremony on January 30, 2015, eSSENCE arranges a workshop in honour of the two of the awarded honorary doctorates at Uppsala University's Faculty of Science and Technology: Professor Linda Petzold, a leading IT researcher; and Professor Arieh Warshel, a computational biologist and joint winner of the Nobel Prize in Chemistry in 2013. PRELIMINARY AGENDA 13:15 Words of Welcome Ingela Nyström, Coordinator of eSSENCE, UU…

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June 2015

Multiscale Materials Modelling 2015

8 June, 2015 - 9 June, 2015
Ångström Uppsala, Sweden

To push the boundaries of e-science closer to realistic applications, and to improve our understanding of chemical and physical phenomena, development of methods and models at all levels is needed, from the electronic scale to coarse-grained simulations. Not least, we must find ways to combine methods in a powerful and creative fashion to bridge the different time and length gaps in a seamless fashion. The national e-science programme eSSENCE – where Uppsala University, Lund University and Umeå University are partners…

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